Using carbon isotope fractionation to constrain the extent of methane dissolution into the water column surrounding a natural hydrocarbon gas seep in the northern Gulf of Mexico

Author Posting. © American Geophysical Union, 2018. This article is posted here by permission of American Geophysical Union for personal use, not for redistribution. The definitive version was published in Using carbon isotope fractionation to constrain the extent of methane dissolution into the water column surrounding a natural hydrocarbon gas seep in the northern gulf of Mexico. Geochemistry Geophysics Geosystems, 19(11), (2018); 4459-4475., doi:10.1029/2018GC007705.A gas bubble seep located in the northern Gulf of Mexico was investigated over several days to determine whether changes in the stable carbon isotopic ratio of methane can be used as a tracer for methane dissolution through the water column. Gas bubble and water samples were collected at the seafloor and throughout the water column for isotopic ratio analysis of methane. Our results show that changes in methane isotopic ratios are consistent with laboratory experiments that measured the isotopic fractionation from methane dissolution. A Rayleigh isotope model was applied to the isotope data to determine the fraction of methane dissolved at each depth. On average, the fraction of methane dissolved surpasses 90% past an altitude of 400 m above the seafloor. Methane dissolution was also investigated using a modified version of the Texas A&M Oil spill (Outfall) Calculator (TAMOC) where changes in methane isotopic ratios could be calculated. The TAMOC model results show that dissolution depends on depth and bubble size, explaining the spread in measured isotopic ratios during our investigations. Both the Rayleigh and TAMOC models show that methane bubbles quickly dissolve following emission from the seafloor. Together, these results show that it is possible to use measurements of natural methane isotopes to constrain the extent of methane dissolution following seafloor emission.This research was made possible by two grants from the Gulf of Mexico Research Initiative: Gulf Integrated Spill Response (GISR) Consortium (awarded to J. D. K. and S. A. S.) and Center for Integrated Modeling and Assessment of the Gulf Ecosystem (C‐IMAGE) II (awarded to S. A. S.). Additional support was provided by the U.S. Department of Energy (DE‐FE0028980; awarded to J. D. K.). Data are publicly available through the Gulf of Mexico Research Initiative Information & Data Cooperative (GRIIDC). Methane concentration and isotopic ratio data can be found at https://data.gulfresearchinitiative.org/data/R1.x137.000:0025, and TAMOC model scripts and results are found at https://data.gulfresearchinitiative.org/data/R1.x137.000:0026. The coversion of methane isotopic ratio data used in this manuscript can be found at https://data.gulfresearchinitiative.org/data/R1.x137.000:0028. We want to thank the captain and crew of the E/V Nautilus and the operators of ROV Hercules and Argus during the GISR G08 cruise and Nicole Raineault for their outstanding support at sea. Acoustically identifying the bubble flare was managed by Andone Lavery, and support for collecting gas and water samples was provided by John Bailey. We also want to thank Sean Sylva for analytical assistance on shore, Inok Jun for helping create the sampling schematics, and David Brink‐Roby for helping create the sample site map.2019-04-2

Assessing marine gas emission activity and contribution to the atmospheric methane inventory: A multidisciplinary approach from the Dutch Dogger Bank seep area (North Sea)

We present a comprehensive study showing new results from a shallow gas seep area in approximate to 40 m water depth located in the North Sea, Netherlands sector B13 that we call Dutch Dogger Bank seep area. It has been postulated that methane presumably originating from a gas reservoir in approximate to 600 m depth below the seafloor is naturally leaking to the seafloor. Our ship-based subbottom echosounder data indicate that the migrating gas is trapped in numerous gas pockets in the shallow sediments. The gas pockets are located at the boundary between the top of the Late Pliocene section and overlying fine-grained sediments, which were deposited during the early Holocene marine transgression after the last glaciation. We mapped gas emissions during three R/V Heincke cruises in 2014, 2015, and 2016 and repeatedly observed up to 850 flares in the study area. Most of them (approximate to 80%) were concentrated at five flare clusters. Our repeated analysis revealed spatial similarities of seep clusters, but also heterogeneities in emission intensities. A first calculation of the methane released from these clusters into the water column revealed a flow rate of 277 L/min (SD=140), with two clusters emitting 132 and 142 L/min representing the most significant seepage sites. Above these two flare clusters, elevated methane concentrations were recorded in atmospheric measurements. Our results illustrate the effective transport of methane via gas bubbles through a approximate to 40 m water column, and furthermore provide an estimate of the emission rate needed to allow for a contribution to the atmospheric methane concentration

Carbon cycling fed by methane seepage at the shallow Cumberland Bay, South Georgia, sub-Antarctic

Recent studies have suggested that the marine contribution of methane from shallow regions and melting marine-terminating glaciers may have been underestimated. Here we report on methane sources and potential sinks associated with methane seeps in Cumberland Bay, South Georgia's largest fjord system. The average organic carbon content in the upper 8 m of the sediment is around 0.65 wt %; this observation combined with Parasound data suggest that the methane gas accumulations probably originate from peat-bearing sediments currently located several tens of meters below the seafloor. Only one of our cores indicates upward advection; instead most of the methane is transported via diffusion. Sulfate and methane flux estimates indicate that a large fraction of methane is consumed by anaerobic oxidation of methane (AOM). Carbon cycling at the sulfate-methane transition (SMT) results in a marked fractionation of the δ¹³C-CH₄ from an estimated source value of −65‰ to a value as low as −96‰ just below the SMT. Methane concentrations in sediments are high, especially close to the seepage sites (∼40 mM); however, concentrations in the water column are relatively low (max. 58 nM) and can be observed only close to the seafloor. Methane is trapped in the lowermost water mass; however, measured microbial oxidation rates reveal very low activity with an average turnover of 3.1 years. We therefore infer that methane must be transported out of the bay in the bottom water layer. A mean sea-air flux of only 0.005 nM/m² s confirms that almost no methane reaches the atmosphere

Indications of a link between seismotectonics and CH4 release from seeps off Costa Rica

Measurements of CH4 concentrations in the bottom water during two discrete sampling periods in subsequent years above different cold seeps at the Pacific margin off Costa Rica indicate large-scale variations of CH4 release. CH4 is emitted from mud extrusions and a slide scar at 1000–2300 m water depth. Maximum CH4 concentrations were found to be lower above all investigated sites in autumn 2003 than in autumn 2002 although seep sites are up to 300 km apart. Tidal and current changes were observed but found to apply only to individual seep sites. Increased seismic activity connected to the moment magnitude (M W ) 6.4 earthquake offshore Costa Rica in June 2002 could have had an impact on all seep sites and thereby caused an increase in CH4 emission. This is supported by the largest variations of CH4 concentration found above mud extrusions located above faults likely more strongly affected by tectonic movements. Even though our data indicate a relation between seismicity and CH4 seepage, the relation is not proven, and future work is needed to comprehensively test this hypothesis

Dissolved methane distributions and air-sea flux in the plume of a massive seep field, Coal Oil Point, California

Author Posting. © American Geophysical Union, 2007. This article is posted here by permission of American Geophysical Union for personal use, not for redistribution. The definitive version was published in Geophysical Research Letters 34 (2007): L22603, doi:10.1029/2007GL031344.Large quantities of natural gas are emitted from the seafloor into the stratified coastal ocean near Coal Oil Point, Santa Barbara Channel, California. Methane was quantified in the down current surface water at 79 stations in a 280 km2 study area. The methane plume spread over an area of ~70 km2 and emitted on the order of 5 × 104 mol d−1 to the atmosphere. A monthly time series at 14 stations showed variable methane concentrations which were correlated with changing sub-mesoscale surface currents. Air-sea fluxes estimated from the time series indicate that the air-sea flux derived for the 280 km2 area is representative of the daily mean flux from this area. Only 1% of the dissolved methane originating from Coal Oil Point enters the atmosphere within the study area. Most of it appears to be transported below the surface and oxidized by microbial activity.The research was supported by the University of California Energy Institute and the National Science Foundation (OCE 0447395)

A water column study of methane around gas flares located at the West Spitsbergen continental margin

In the Arctic Seas, the West Spitsbergen continental margin represents a prominent methane seep area. In this area, free gas formation and gas ebullition as a consequence of hydrate dissociation due to global warming are currently under debate. Recent studies revealed shallow gas accumulation and ebullition of methane into the water column at more than 250 sites in an area of 665 km2. We conducted a detailed study of a subregion of this area, which covers an active gas ebullition area of 175 km2 characterized by 10 gas flares reaching from the seafloor at~245 m up to 50 m water depth to identify the fate of the released gas due to dissolution of methane from gas bubbles and subsequent mixing, transport and microbial oxidation. The oceanographic data indicated a salinity-controlled pycnocline situated ~20 m above the seafloor. A high resolution sampling program at the pycnocline at the active gas ebullition flare area revealed that the methane concentration gradient is strongly controlled by the pycnocline. While high methane concentrations of up to 524 nmol L−1 were measured below the pycnocline, low methane concentrations of less than 20 nmol L−1 were observed in the water column above. Variations in the δ13CCH4 values point to a 13C depleted methane source (~−60‰ VPDB) being mainly mixed with a background values of the ambient water (~−37.5‰ VPDB). A gas bubble dissolution model indicates that ~80% of the methane released from gas bubbles into the ambient water takes place below the pycnocline. This dissolved methane will be laterally transported with the current northwards and most likely microbially oxidized in between 50 and 100 days, since microbial CH4 oxidation rates of 0.78 nmol d−1 were measured. Above the pycnocline, methane concentrations decrease to local background concentration of ~10 nmol L−1. Our results suggest that the methane dissolved from gas bubbles is efficiently trapped below the pycnocline and thus limits the methane concentration in surface water and the air–sea exchange during summer stratification. During winter the lateral stratification breaks down and fractions of the bottom water enriched in methane may be vertically mixed and thus be potentially an additional source for atmospheric methane

U.S. Natural Resources and Climate Change: Concepts and Approaches for Management Adaptation

Public lands and waters in the United States traditionally have been managed using frameworks and objectives that were established under an implicit assumption of stable climatic conditions. However, projected climatic changes render this assumption invalid. Here, we summarize general principles for management adaptations that have emerged from a major literature review. These general principles cover many topics including: (1) how to assess climate impacts to ecosystem processes that are key to management goals; (2) using management practices to support ecosystem resilience; (3) converting barriers that may inhibit management responses into opportunities for successful implementation; and (4) promoting flexible decision making that takes into account challenges of scale and thresholds. To date, the literature on management adaptations to climate change has mostly focused on strategies for bolstering the resilience of ecosystems to persist in their current states. Yet in the longer term, it is anticipated that climate change will push certain ecosystems and species beyond their capacity to recover. When managing to support resilience becomes infeasible, adaptation may require more than simply changing management practices—it may require changing management goals and managing transitions to new ecosystem states. After transitions have occurred, management will again support resilience—this time for a new ecosystem state. Thus, successful management of natural resources in the context of climate change will require recognition on the part of managers and decisions makers of the need to cycle between “managing for resilience” and “managing for change.

De novo TBR1 variants cause a neurocognitive phenotype with ID and autistic traits:report of 25 new individuals and review of the literature

TBR1, a T-box transcription factor expressed in the cerebral cortex, regulates the expression of several candidate genes for autism spectrum disorders (ASD). Although TBR1 has been reported as a high-confidence risk gene for ASD and intellectual disability (ID) in functional and clinical reports since 2011, TBR1 has only recently been recorded as a human disease gene in the OMIM database. Currently, the neurodevelopmental disorders and structural brain anomalies associated with TBR1 variants are not well characterized. Through international data sharing, we collected data from 25 unreported individuals and compared them with data from the literature. We evaluated structural brain anomalies in seven individuals by analysis of MRI images, and compared these with anomalies observed in TBR1 mutant mice. The phenotype included ID in all individuals, associated to autistic traits in 76% of them. No recognizable facial phenotype could be identified. MRI analysis revealed a reduction of the anterior commissure and suggested new features including dysplastic hippocampus and subtle neocortical dysgenesis. This report supports the role of TBR1 in ID associated with autistic traits and suggests new structural brain malformations in humans. We hope this work will help geneticists to interpret TBR1 variants and diagnose ASD probands

Phenotypic spectrum and transcriptomic profile associated with germline variants in TRAF7

PURPOSE: Somatic variants in tumor necrosis factor receptor-associated factor 7 (TRAF7) cause meningioma, while germline variants have recently been identified in seven patients with developmental delay and cardiac, facial, and digital anomalies. We aimed to define the clinical and mutational spectrum associated with TRAF7 germline variants in a large series of patients, and to determine the molecular effects of the variants through transcriptomic analysis of patient fibroblasts. METHODS: We performed exome, targeted capture, and Sanger sequencing of patients with undiagnosed developmental disorders, in multiple independent diagnostic or research centers. Phenotypic and mutational comparisons were facilitated through data exchange platforms. Whole-transcriptome sequencing was performed on RNA from patient- and control-derived fibroblasts. RESULTS: We identified heterozygous missense variants in TRAF7 as the cause of a developmental delay-malformation syndrome in 45 patients. Major features include a recognizable facial gestalt (characterized in particular by blepharophimosis), short neck, pectus carinatum, digital deviations, and patent ductus arteriosus. Almost all variants occur in the WD40 repeats and most are recurrent. Several differentially expressed genes were identified in patient fibroblasts. CONCLUSION: We provide the first large-scale analysis of the clinical and mutational spectrum associated with the TRAF7 developmental syndrome, and we shed light on its molecular etiology through transcriptome studies

Les droits disciplinaires des fonctions publiques : « unification », « harmonisation » ou « distanciation ». A propos de la loi du 26 avril 2016 relative à la déontologie et aux droits et obligations des fonctionnaires

The production of tt‾ , W+bb‾ and W+cc‾ is studied in the forward region of proton–proton collisions collected at a centre-of-mass energy of 8 TeV by the LHCb experiment, corresponding to an integrated luminosity of 1.98±0.02 fb−1 . The W bosons are reconstructed in the decays W→ℓν , where ℓ denotes muon or electron, while the b and c quarks are reconstructed as jets. All measured cross-sections are in agreement with next-to-leading-order Standard Model predictions.The production of $t\overline{t}$, $W+b\overline{b}$ and $W+c\overline{c}$ is studied in the forward region of proton-proton collisions collected at a centre-of-mass energy of 8 TeV by the LHCb experiment, corresponding to an integrated luminosity of 1.98 $\pm$ 0.02 \mbox{fb}^{-1}. The $W$ bosons are reconstructed in the decays $W\rightarrow\ell\nu$, where $\ell$ denotes muon or electron, while the $b$ and $c$ quarks are reconstructed as jets. All measured cross-sections are in agreement with next-to-leading-order Standard Model predictions